BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006H11SP1|AL425609
(933 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1730 1672 0.0
>3x_Contig1730
Length = 17223
Score = 1672 bits (835), Expect = 0.0
Identities = 900/928 (96%), Gaps = 3/928 (0%)
Strand = Plus / Plus
Query: 9 tgggtkaaaactttttctaaaaatttgaaagtactagttagcaatttggagttattttca 68
||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7355 tgggtcaaaactttctctaaaactttgaaagtactagttagcaatttggagttattttca 7414
Query: 69 tctagaagttcatcccaagattgttgagaaartggtaactggtttgaagcggataatgct 128
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7415 tctagaagttcatcccaagattgttgagaaagtggtaactggtttgaagcggataatgct 7474
Query: 129 ttttgcaacttaattctagagtmtaaaattttatcgaagaatttattctgttgtaagatg 188
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 7475 ttttgcaacttaattctagagtctagaattttatcgaagaatttattctgttgtaagatg 7534
Query: 189 gcataacctttggaagcatctctctgagcggaatgtgctaaattattaatcacttgttta 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7535 gcataacctttggaagcatctctctgagcggaatgtgctaaattattaatcacttgttta 7594
Query: 249 atttgcgtctgtactatcttggccaatttctctttcttcatcgcagtmtcctcatcttcc 308
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 7595 gtttgcgtctgtactatcttggccaatttctctttcttcatcgcagtctcctcatcttcc 7654
Query: 309 tctctatctttctctatttctramtcggaaatggcttcarattcggatacatcttctgaa 368
||||||||||||||||||||| | |||||| |||||||| ||||||||||||||||||||
Sbjct: 7655 tctctatctttctctatttctgactcggaagtggcttcagattcggatacatcttctgaa 7714
Query: 369 tcgcttctaaaggatactgcatcactctcttcaaatccggattcagcttcagactcactt 428
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7715 tcgcttctaaaggatactgcatcactctcttcagatccggattcagcttcagactcactt 7774
Query: 429 tctccttgttcaggagcrtccatttcttcgtcattraacaattctgctctagaccctttg 488
||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 7775 tctccttgttcaggagcgtccatttcttcgtcattgaacagttctgctctagaccctttg 7834
Query: 489 ctcccgacgtatttmttatcctttacggccaatccttgatcaaccacatttctaartwtt 548
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct: 7835 ctcccgacgtatttcttatcctttacggccaatccttgatcgaccacatttctaagtttt 7894
Query: 549 gactttmctactgccacataatgctgtttcttcaactcttcttcgctctcatcgccagaa 608
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7895 gactttcctactgccacataatgctgtttcttcaactcttcttcgctctcatcgccagaa 7954
Query: 609 ctaacatctgaataggacccaccatgttgaaatacaccttcatcattctcaatgtcgaaa 668
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7955 ctaacatctgaatcggacccaccatgttgaaatacaccttcatcattctcaatgtcgaaa 8014
Query: 669 tcttcaacttgtggtttattcgcaatgtctgcgatttgttcggccaaagactttttaccc 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8015 tcttcaacttgtggtttattcgcaatgtctgcgatttgttcggccaaagactttttaccc 8074
Query: 729 atttaatctgcgtgtattttacgtgtacttcaccgtcctcacttacaactcactattgag 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8075 atttaatctgcgtgtattttacgtgtacttcaccgtcctcacttacaactcactattgag 8134
Query: 789 tacagctgatttatccatataagagtctctcatctcatctcatctcgtctcatctctcaa 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8135 tacagctgatttatccatataagagtctctcatctcatctcatctcgtctcatctctcaa 8194
Query: 849 acatcaactttcttgaatttttcaactacaaaaaagaaactccagattactttttcggat 908
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 8195 acatcaactttcttgaatttttcaactacaaaaaagaaactccagattaccttttcggat 8254
Query: 909 yt--caaaagaagagg-aaatatataga 933
| ||||||||||| |||||||||||
Sbjct: 8255 cttcaaaaagaagaggaaaatatataga 8282
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8194
Number of Sequences: 1807
Number of extensions: 8194
Number of successful extensions: 443
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)